Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs2986062 chr1:182431713 A/T 1.66E-7 254 30.93 36.27 6.72 KM Plot
SARC rs2986429 chr11:34918375 A/G 2.16E-5 258 20.88 29.9 35.17 KM Plot
SARC rs3118072 chr11:34973479 T/C 6.27E-5 254 20.17 29.9 33.2 KM Plot
SARC rs3188939 chr4:7034028 A/T 9.46E-5 258 16.17 34 32.35 KM Plot
SARC rs33999310 chr3:52883332 G/A 7.52E-12 256 31.27 34.57 3.1 KM Plot
SARC rs34082926 chr16:4638652 A/T 3.01E-5 252 17.25 36.4 30.77 KM Plot
SARC rs34121720 chr3:53072167 C/T 0 256 32.3 31.97 2.13 KM Plot
SARC rs34131721 chr3:53130399 T/TA 0 254 32.3 31.97 2.13 KM Plot
SARC rs34196076 chr3:42581939 C/T 2.36E-10 254 31.77 36.6 5.32 KM Plot
SARC rs34205820 chr16:4634290 G/GT 8.78E-5 247 18.33 36.4 30.73 KM Plot
SARC rs34219101 chr4:6971605 G/A 1.22E-5 251 32.4 34.58 12.82 KM Plot
SARC rs34238610 chr3:53026480 A/T 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs34244302 chr3:53102236 C/G 0 254 31.57 31.97 2.13 KM Plot
SARC rs34313969 chr3:52995166 A/G 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs34326372 chr2:70240478 G/GA 5.94E-5 251 32.13 34 14.58 KM Plot